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Fiji is an image processing package—a "batteries-included" distribution of ImageJ, bundling a lot of plugins which facilitate scientific image analysis.
 

Information

Availability: 

RedHat SL6https://fiji.sc/#download
RedHat EL7pre-installed in system path on maxwell only!
Other linux

https://fiji.sc/#download

Windowshttps://fiji.sc/#download
Mac OSXhttps://fiji.sc/#download

  

Using  fiji on maxwell

There is no need for any special setup, just issue 'fiji'. A recent kernel security fix (stack guard gap) causes problems with some java applications like fiji. The kernels effected are: 3.10.0-514.21.2.el7.If fiji crashes right at the beginning, please try the following workaround:

[max]% fiji -Xss2m -- 

 

 

 

 


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