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News

  • 2020-02-14 PowerFit installed
  • 2020-02-12 PyEM updated
  • 2020-02-06 Relion 3.1-beta updated
  • 2020-02-05 cryoSPARC updated to 2.13.2
  • 2020-02-03 ProTomo 2.4.3 installed
  • 2020-01-22 SIDESPLITTER installed (features)
  • 2020-01-07 EMAN2 git conda environment updated
  • 2020-01-07 crYOLO updated to version 1.5.6
  • 2019-11-19 bashEM tools installed
  • 2019-11-11 MicrographCleaner conda environment installed
  • 2019-11-04 Nextflow data-driven processing pipeline installed
  • 2019-10-17 SuRVos 1.1.3 conda environment installed
  • 2019-10-08 SPHIRE 1.3 / EMAN 2.31 binary release installed
  • 2019-09-27 Dynamo 1.1.451 installed



Overview

The CSSB CryoEM facility uses and/or provides the following resources maintained mainly by DESY IT services:

  • Computing Infrastructure:
  • Storage:
    • BeeGFS: incoming microscope data, data analysis and cluster processing space (NO BACKUP!!!)

    • dCache: archive space for microscope data
    • DESY Cloud: exchange data with collaborators
  • Software:
    • CryoEM software installed and maintained by Wolfgang Lugmayr and Daven Vasishtan.



Getting Started

First time users should read the CSSB getting started section next.



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