Space Details:

Key	IS
Name	Computing
Description	Temporary dump from Confluence
Created by	schluenz (Jul 22, 2014 15:20)

Available Pages:

Computing @ DESY
- Data privacy @ DESY scientific computing resources
- How-to articles
  - AMD GPU
  - Cloning a confluence page tree
  - Creating a IT ticket best practices
  - Finding licenses
  - Finding resources
  - Finding Software on Maxwell
  - gitlab as a container registry
    - gitlab as a docker registry
    - gitlab as a singularity registry
  - Kerberos & AFS - Obtaining tickets and token without password
  - License Status
    - Comsol_Status
    - MATHEMATICA_Status
    - MATLAB_Status
  - Local Software installation
  - Mounting remote directories
  - Upload to Confluence using curl
  - Upload to DESYcloud using curl
- Resources
  - BIRD
    - Prerequisites
    - DESY specifics / Quickstart
    - Submitting Jobs
      - Job Requirements (and failures)
    - Checking & Managing own Jobs
    - Checking Pool Status
    - Something went wrong
    - Migration from SGE to HTCondor
    - EL8 in Bird
    - Best Practices
      - Staging Files
      - WAN Reads
    - Tips & Tricks
      - get an interactive session on a batchnode
      - Individual job status and return codes
      - job environments
      - job run times and job bugs
      - Keep unsuccessful jobs in the queue or rerun them
      - large number of jobs
      - More sophisticated job submit file examples
      - ssh port forwarding or ssh proxy jump
      - Some jobs out of a cluster don't complete successfully
      - How much memory does my job need ?
      - Managing shell sessions with screen
      - Selecting Nodes by Benchmark Power
      - Condor Commands: Selections and Formating
      - Dynamic Conditions during job starts
    - GPU on NAF
    - Howto use directed acyclic Graphs (DAG) in BIRD
    - Interactive batchsession
    - Using FastX as NAF Remote Desktop
    - Group Specifics
    - Utilization Plots
    - A short WalkThrough
    - Authentication: Local, AFS, Grid
    - Command Quick Reference
      - ClassAds
      - Condor Job States
    - Condor inner details
    - Containers
      - Apptainer/Singularity
        
        Apptainer/Singularity Cache and TMP Directories
        
        Building Containers (Docker, Apptainer/Singularity)
        
        Building a Apptainer/Singularity Container
        
        Building Apptainer/Singularity Containers in Gitlab
        
        Quick&Dirty build machine
        
        Environment Variables
        
        Isolation
        
        Problems in Containers with 'No space left on device' due to limited TMP directories
        
        Pulling/Bootstrapping Containers from other Repositories or Hubs with Apptainer/Singularity
        
        Using Kerberos Tickets and AFS Tokens from Inside a Container
      - Singularity/Apptainer support in BIRD
    - How to use Grid resources in batch jobs
      - DEPRECATED: Mounting CERNBox/EOS locally
    - HTCondor FAQ and common problems
    - Python Bindings
    - Software on the NAF
    - Storage Resources and File System Layout
    - Links & Documentation
    - Condor Job Parameters and ClassAds
    - Quotas, priorities and fairshare - why are my jobs not starting immediately? ☹
    - Language settings in interactive/ssh sessions
    - ATLAS@NAF
      - Create and update Rucio Datasets from DUST
    - VisualStudioCode remote sessions on Workgroup Server
  - Maxwell
  - NAF - National Analysis Facility
    - CERN AFS disconnection test 2021 Oct.25-Nov.01
      - User Observations
    - DUST Usage & Lifecycle Policy
    - Experiment pages and docu
    - Getting a NAF account
    - Getting support and FAQ
    - Jupyter on NAF
    - NAF Batch Farm and Batch Jobs
    - NAF - Grid CEs
    - NAF Login, WGS and remote Desktop
    - News
      - 2019 August 07: ATLAS storage maintenance
    - NUC: NAF Users Committee
    - References: Articles, Papers, Proceedings
    - Reporting Storage Issues
    - Security @ NAF
    - Storage on and around the NAF
  - Grid & Tier-II
  - Cluster Venn Diagram
- Software
  - Alphabetical List of Packages
  - Integrated Applications
    - Amira-Avizo
    - Ansys
      - Lumerical
      - Parallel Ansys on Maxwell
    - Comsol Multiphysics
      - Comsol Model Manager
      - Comsol storage locations
      - Parallel COMSOL on Maxwell
    - IDL
      - IDL installation
      - IDL New License Server
    - Maple
    - Mathematica
      - Mathematica License Server
      - Parallel Mathematica on Maxwell
    - MATLAB
      - Matlab license servers
      - Matlab Mac OSX Installation
      - Matlab Mac OSX Installation - Using the Lite Installer
      - Matlab Windows installation
    - Octave
    - Origin
    - Paraview
    - R
    - RooT
    - Scilab
  - Mathematical Libraries
    - fftw
    - gmp
    - gsl
    - lapack
    - metis
    - mumps
    - NLopt
    - openblas
    - petsc
  - Miscellaneous Software
    - FastX2
    - FastX3
    - Oracle
      - Oracle under Linux
    - TeX
  - Programming
    - Compiler
      - clang
      - GCC
      - Intel
      - NAG
      - NVHPC
      - PGI
    - cuda
    - devtoolset
    - JetBrains
    - Julia
    - MPI
      - compat-openmpi
      - mpich
      - mvapich
      - openmpi
      - openmpi-intel
    - Profiling
      - gprof
      - OProfile
    - Python
- Belle II Re-calibration on the NAF