News

• 2022-11-24 Topaz 0.2.5a with filement extenstion intalled
• 2022-11-09 Scipion updated to 3.0.12-stable and 3.0.13-tomo
• 2022-11-08 ChimeraX-StarMap 1.1 installed
• 2022-10-26 AlphaPulldown upgraded to 0.22.1
• 2022-10-26 IMOD alpha upgraded to 4.12.30
• 2022-10-24 reliontomotools 0.0.5 installed
• 2022-10-21 cryoCARE updated 0.2.1
• 2022-10-21 cryoDRGN updated to 1.1.0
• 2022-10-14 AreTomo updated to 1.3.0
• 2022-10-14 Phenix updated to 1.20.1-4487
• 2022-10-07 Relion 4.0.0 optimized maxwell versions installed
• 2022-10-04 Model Angelo git installed

Overview

The CSSB CryoEM facility uses and/or provides the following resources maintained mainly by DESY IT services:

• Computing Infrastructure:
  • FastX2: remote desktop environment
  • Maxwell cluster: processing your data (see Maxwell for CSSB)
  • 3 high-end workstations for Windows-based software like Warp/M, ChimeraX/Isolde, ...
• Storage:

  • BeeGFS: incoming microscope data, data analysis and cluster processing space (NO BACKUP!!!)

  • dCache: archive space for microscope data
  • DESY Sync & Share: exchange data with collaborators
• Software:
  • CryoEM software installed and maintained by Daven Vasishtan and  Wolfgang Lugmayr.
• Archive:
  • The DESY dCache team offers a tape archive infrastructure for long-term storage of your data.

Getting Started

First time users should read the CSSB getting started section next.